EPA to States: Don’t Rock the Boat with Water Quality Certification Review

Jun 19, 2019

Reading Time : 3 min

The guidance follows an April 10, 2019, Executive Order from President Trump that continued the administration’s deregulatory push. The Order directed EPA to review and update interim guidance from 2010 addressing how states and tribes issue water quality certifications, then review and update its regulations by May 2020 to ensure consistency with the “federalism consideration underlying section 401” and the goal of “promot[ing] private investment in the Nation’s energy infrastructure.”2 EPA’s regulations implementing Section 401 have not been updated since 1971.

Section 401 provides states and authorized tribes with a key tool to help maintain water quality within their borders, in collaboration with federal permitting agencies. Under Section 401, a federal agency may not issue a permit or license for a project that may result in discharge to waters of the United States unless the applicable state or tribe issues a certification verifying compliance with existing water quality requirements, or waives the certification requirement.3

In recent years, however, states have stretched this authority to slow or stop major energy projects. For instance, last month the New York State Department of Environmental Conservation denied a certification for the Williams natural gas pipeline, citing greenhouse gas emissions from the project and indirect impacts to water and coastal resources, requiring mitigation.4 Similarly, in September 2017, the Washington Department of Ecology denied a certification for the proposed Millennium coal export terminal, citing impacts related to boat traffic, climate change, and air pollution, in addition to effects on water quality.5

In response to these state actions hindering large private-sector projects, EPA now warns that if a state or tribe issues a Section 401 certification that has “conditions beyond the scope of Section 401, i.e., conditions not related to water quality requirements, or has denied a water quality certification for reasons beyond the scope of Section 401,” the applicable federal permitting agencies should determine whether the state or tribe has waived its Section 401 authority or to issue the permit or license with the conditions.6

The guidance also clarifies review timing; the one-year period for states and tribes to review and act on requests for certification should begin at the “receipt of the certification request,” rather than upon receipt of a “completed application” as was provided in the outgoing guidance.7 According to EPA, waiting until an application was “complete” to begin the time period for review is inappropriate because Section 401 does not use the term, nor does it provide states or tribes with authority to determine that a request is incomplete or delay the start of the timeline on that basis. Additionally, EPA incorporated the D.C. Circuit’s recent ruling in Hoopa Valley Tribe v. FERC8 that the one-year period does not reset when a project proponent withdraws then resubmits a virtually identical certification request. Finally, EPA encouraged states and tribes not to wait for completion of review under the National Environmental Policy Act (NEPA) to act on permit requests, because those reviews are broader in scope than Section 401 reviews.9

Notably, the guidance is nonbinding; EPA made clear that it does not impose any new legal requirements on states, tribes or permit applicants.10 States are therefore free to ignore the guidance without fear of legal repercussions, at least for the time being—EPA indicated that it may use parts of the guidance in its forthcoming rulemaking to update the Section 401 regulations in accordance with Executive Order 13868.

1 Clean Water Act Section 401 Guidance for Federal Agencies, States, and Authorized Tribes, U.S. Environmental Protection Agency (June 7, 2019) [hereinafter “Guidance”], https://www.epa.gov/sites/production/files/2019-06/documents/cwa_section_401_guidance.pdf.

2 Exec. Order No. 13868, 84 Fed. Reg. 15495 (April 10, 2019).

3 33 U.S.C. § 1341(a)(1).

4 Letter from Daniel Whitehead, Director, Division of Environmental Permits of the New York State Department of Environmental Conservation, to Joseph Dean, Manager, Environmental Health and Safety Department of Transcontinental Gas Pipe Line Company, LLC (May 15, 2019), https://www.law360.com/articles/1160360/attachments/0.

5 Letter from Maia Bellon, Director, State of Washington Department of Ecology, to Kristin Gaines, Millennium Bulk Terminals-Longview, LLC (September 26, 2017), http://blogs2.law.columbia.edu/climate-change-litigation/wp-content/uploads/sites/16/case-documents/2018/20180906_docket-18-2-00994-08_petition-for-review.pdf.

6 Guidance, at 4.

7 Id. at 3.

8 913 F.3d 1099 (D.C. Cir. 2019).

9 Guidance, at 5.

10 Id. at 2.

Share This Insight

Previous Entries

Speaking Energy

November 6, 2025

The market for the direct procurement of energy by commercial and industrial buyers has been active in the U.S. for a decade.  In years past, buyers often engaged in such purchases on a voluntary basis to achieve their goals to use renewable energy.  These days, C&I buyers are turning to direct procurement or self-supply to obtain a reliable source of energy.  Sufficient and accessible energy from a local utility may not be available or may be materially delayed or trigger significant capital costs.  This is a material change driven in part by increased demand for electricity, including demand from data centers, EV infrastructure and industrial development.       

...

Read More

Speaking Energy

October 27, 2025

On October 23, 2025, the Secretary of the U.S. Department of Energy (DOE) directed the Federal Energy Regulatory Commission (FERC) to conduct a rulemaking to assert jurisdiction over load interconnections to the bulk electric transmission system and establish standardized procedures for the interconnection of large loads.1 The Directive included an advanced notice of proposed rulemaking (ANOPR) that sets forth the legal justification for asserting jurisdiction over transmission-level load interconnections and fourteen principles that should inform FERC’s rulemaking process. The Secretary has directed FERC to take “final action” on the Directive no later than April 30, 2026.

...

Read More

Speaking Energy

October 24, 2025

On October 21, 2025, the U.S. Department of Energy (DOE) issued a final order (DOE/FECM Order No. 5264-A1) granting Venture Global CP2 LNG, LLC long-term authorization to export up to 1,446 billion cubic feet per year of domestically produced liquefied natural gas (LNG) from its Louisiana facility to countries without a free trade agreement with the United States (Non-FTA Countries). The final order follows a March 2025 Conditional Order,2 which issued while DOE was still completing its review of the agency’s 2024 LNG Export Study.3 The final order confirms that the project’s export volume and term authorization (through December 31, 2050) are unchanged, but provides for a three-year “make-up period” to allow export of any approved volume not shipped during the original term.

...

Read More

Speaking Energy

October 9, 2025

On October 1, 2025, the Federal Energy Regulatory Commission (FERC or the Commission) issued Order No. 914 amending certain Commission regulations to incorporate a conditional sunset date in compliance with the Trump administration’s April 2025 Executive Order, “Zero-Based Regulatory Budgeting to Unleash American Energy” (the EO).

...

Read More

Speaking Energy

October 8, 2025

Akin is pleased to serve as a gold sponsor for Infocast’s Energy Independence Summit in Houston, October 21-23. Energy partner Charlie Ofner will moderate the Macroeconomics of Domestic Energy Independence panel, projects & energy transition partner Shariff Barakat will lead Opportunities in US Manufacturing: How Big, How Fast, How FEOC?, and counsel Taha Qureshi will guide the discussion on Cornerstones for Energy Independence: Investing in Grid Security & Cybersecurity.

...

Read More

Speaking Energy

October 6, 2025

As of October 6, 2025, the Federal Energy Regulatory Commission (FERC) continues to operate despite the lapse in appropriations that resulted in a government shutdown on October 1, 2025. While FERC receives appropriations from Congress, it primarily is self-funded through fees and charges obtained from the industries it regulates, offsetting its total costs. Hence, during prior government shutdowns in 2018 and 2013, the agency was able to continue operations. However, FERC published a plan for operating in the event of a lapse in appropriations on September 30, 2025, available here

...

Read More

Speaking Energy

September 8, 2025

On September 4, 2025, the Senate Energy and Natural Resources Committee convened a hearing to consider the nominations of Laura Swett and David LaCerte to serve as commissioners at the Federal Energy Regulatory Commission (FERC or Commission). Swett is a former FERC Staff that served as legal and policy advisor to former FERC Chairman Kevin McIntyre and Commission Bernard McNamee. LaCerte is an attorney in private practice that previously held positions at the Chemical Safety and Hazard Investigation Board and the Louisiana Department of Veterans Affairs.

...

Read More

Speaking Energy

September 9, 2025

On August 29, 2025, Christopher Wright, the Secretary of the U.S. Department of Energy (DOE) submitted a proposal to the Federal Energy Regulatory Commission (FERC) under section 403 of the Department of Energy Organization Act (DOE Organization Act), asking that FERC terminate its long-running proceeding in Docket No. PL18-1, which addresses proposed updates to its policy statement on the Certification of New Interstate Natural Gas Facilities. The docket resulted in a draft policy statement that has never been finalized, nor relied upon by FERC in a published order, but would require FERC to consider environmental impacts and potential mitigation prior to making a public interest determination under the Natural Gas Act (NGA). The Secretary asks FERC to rescind the draft policy statement in its entirety to remove any uncertainty in gas infrastructure development. Rescission would require FERC to initiate a new docket and develop a new record should it want to reinitiate similar policy changes in the future.

...

Read More

© 2025 Akin Gump Strauss Hauer & Feld LLP. All rights reserved. Attorney advertising. This document is distributed for informational use only; it does not constitute legal advice and should not be used as such. Prior results do not guarantee a similar outcome. Akin is the practicing name of Akin Gump LLP, a New York limited liability partnership authorized and regulated by the Solicitors Regulation Authority under number 267321. A list of the partners is available for inspection at Eighth Floor, Ten Bishops Square, London E1 6EG. For more information about Akin Gump LLP, Akin Gump Strauss Hauer & Feld LLP and other associated entities under which the Akin Gump network operates worldwide, please see our Legal Notices page.